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The effect of
steric hindrance between retinal and protein on the function of rhodopsin
Gärtner, Wolfgang1
and Ockenfels, Andreas1
Max-Planck-Institut fuer Strahlenchemie1
Abstract-
A series of retinal analogues has been synthesized with altered intramolecular
(10-methyl-, 10-methyl-13-demethyl-, and 13-demethyl retinal) and intermolecular
(9-demethyl-, 9-ethyl, and 9-isopropyl retinal) steric hindrance. These
chromophore derivatives were incorporated into bovine opsin, and the
thus formed visual pigments were characterized for: (i) their kinetics
of pigment formation, (ii) their stability towards hydroxyl amine in
the dark, (iii) their bleaching quantum yield, and (iv) their bleaching
kinetics in the microseconds-to-seconds time range upon light exposure
(laser-induced flash photolysis). All visual pigment derivatives showed
absorption maxima similar as the native pigment between 490 and 510
nm with the exception of the 9-demethyl derivative, which absorbed significantly
hypsochromic at 460 nm. The pigment formation kinetics revealed an optimized
fit for the native chromophore, retinal. Both, 9- and 13-demethyl retinal
reconstituted slower, probably due to increased conformational flexibility
within the binding pocket. The compounds with enlarged or alternately
positioned substituents were incorporated slower. The most hindered
compound, 9-isopropyl retinal, yielded only ca. 3% of assembled rhodopsin.
The bleaching quantum yield for the intramolecular-hindered analogs
(10-methyl-, 10-methyl-13-demethyl-, and 13-demethyl retinal) also showed
the influence of the altered substitution pattern, whereas 9-demethyl
and 9-ethyl retinal revealed a nearly identical bleaching behavior as
the native pigment. A time-resolved analysis of the bleaching process
demonstrated the strongest effects of the modified substitution pattern:
Whereas 9-demethyl retinal caused an acceleration of the bleaching kinetics,
most drastic in the formation of the meta-II intermediate, all other
retinal derivatives showed a much slower and also altered formation
of the meta-(II) intermediate. In the final bleaching reaction, 10-methyl-13-demethyl
retinal exhibited the slowest kinetics of all analog pigments with a
time constant of 10 hours. We wish to thank Prof. S.E. Braslavsky, MPI
Muelheim, for providing the flash photolysis equipment. A.O. is a recipient
of a grant from the Friedrich-Ebert-Foundation.
Keywords: rhodopsin,
retinal analogs, chromophore-protein interaction, flash photolysis
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